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modENCODE

The National Human Genome Research Institute model organism ENCyclopedia Of DNA Elements

The modENCODE Project will try to identify all of the sequence-based functional elements in the Caenorhabditis elegans and Drosophila melanogaster genomes.

modMine

Explore a hierarchical view of regulatory networks for fly and worm.

amazon

The entire modENCODE data set available for analysis in the Amazon compute cloud.

Find, view and download datasets in bulk.

Download released data using the traditional FTP interface.

Choose an organism below to see GBrowse, Dataset Search links:

  • C. elegans
  • C. brenneri
  • C. briggsae
  • C. japonica
  • C. remanei
  • D. melanogaster
  • D. ananassae
  • D. mojavensis
  • D. pseudoobscura
  • D. simulans
  • D. virilis
  • D. yakuba

Browse Projects

  • D. melanogaster
  • C. elegans
  • Histone Variants

    Genome-wide Chromatin Profiling in Drosophila

    Pi: Steven Henikoff
    Labs: Kamran Ahmad
    Submissions: 7
    Experimental factors: biochemical fraction, cell line, extraction time, sodium chloride concentration
    GBrowse Tracks: 2
  • Histone Variants

    Genome-wide Chromatin Profiling

    Pi: Steven Henikoff
    Labs: Kamran Ahmad, Steven Henikoff
    Submissions: 32
    Experimental factors: developmental stage, biochemical fraction, cell line, extraction time, sodium chloride concentration
    GBrowse Tracks: 32